Papers to Appear

Biometric Methodology

Discussion Paper

Estimating vaccine efficacy over time after a randomized study is unblinded

Anastasios A. Tsiatis and Marie Davidian

Discussion

M. Elizabeth Halloran

Discussion

Holly Janes, Fei Gao, and Alex Luedtke

Discussion

Dean Follmann

Rejoinder

Anastasios A. Tsiatis and Marie Davidian

Multivariate survival analysis in big data: a divide-and-combine approach

Wei Wang, Shou-En Lu, Jerry Q. Cheng, Minge Xie, and John B. Kostis

A consistent version of distance covariance for right-censored survival data and its application in hypothesis testing

Dominic Edelmann, Thomas Welchowski, Axel Benner

Semiparametric analysis of clustered interval-censored survival data using Soft Bayesian Additive Regression Trees (SBART)

Piyali Basak, Antonio Ricardo Linero, Debajyoti Sinha, and Stuart R. Lipsitz

Feature screening with large scale and high dimensional survival data

Grace Yi, Wenqing He, and Raymond J. Carroll

Regression with interval-censored covariates: application to cross-sectional incidence estimation

Doug Morrison, Oliver Laeyendecker, and Ron vBrookmeyer

Modeling semi-competing risks data as a longitudinal bivariate process

Daniel Nevo, Deborah Blacker, Eric B. Larson, and Sebastien Haneuse

Semiparametric estimation of structural nested mean models with irregularly spaced longitudinal observations

Shu Yang

A semi-parametric model for between-subject attributes: applications to beta-diversity of microbiome data

J. Liu, X. Zhang, T. Chen, T. Wu, T. Lin, L. Jiang, S. Lang, L. Liu, L. Natarajan, J.X. Tu, T. Kosciolek, J. Morton, T. Nguyen, B. Schnabl, R. Knight, C. Feng, Y. Zhong, and X.M. Tu

Spatial correlation structures for detections of individuals in spatial capture-recapture models

Ben Courtney Stevenson, Rachel M. Fewster, and Koustubh Sharma

A transformation-free linear regression for compositional outcomes and predictors

Jacob Fiksel, Scott L. Zeger, and Abhirup Datta

A Bayesian nonparametric approach for inferring drug combination effects on mental health in people with HIV

Wei Jin, Yang Ni, Leah H. Rubin, Amanda B. Spence, and Yanxun Xu

Simulation-based estimators of analytically intractable causal effects

Antonio R. Linero

Testing for association in multi-view network data

Lucy L. Gao, Daniela Witten, and Jacob Bien

Restricted function-on-function linear regression model

Ruiyan Luo and Xin Qi

Addressing patient heterogeneity in disease predictive model development

Xu Gao, Weining Shen, Jing Ning, Ziding Feng, and Jianhua Hu

Optimization of sampling designs for pedigrees and association studies

Olivier David, Arnaud Le Rouzic, and Christine Dillmann

Tensor envelope mixture model for simultaneous clustering and multiway dimension reduction

Kai Deng and Xin Zhang

Integrative analysis of multiple case-control studies

Han Zhang, Lu Deng, William Wheeler, Jing Qin, and Kai Yu

Biometric Practice

Discussion Paper

Distributional independent component analysis for diverse neuroimaging modalities

Ben Wu, Subhadip Pal, Jian Kang, and Ying Guo

Discussion

Heather Shappell and Sean L. Simpson

Discussion

Amanda Mejia

Discussion

Kan Keeratimahat and Thomas E. Nichols

Discussion

Beatrijs Moerkerke and Ruth Seurinck

Rejoinder

Ben Wu, Subhadip Pal, Jian Kang, and Ying Guo

Inferring UK COVID-19 fatal infection trajectories from daily mortality data: were infections already in decline before the UK lockdowns?

Simon N. Wood

Efficient detection and classification of epigenomic changes under multiple conditions

Pedro L. Baldoni, Naim U. Rashid, and Joseph G. Ibrahim

Utilizing stability criteria in choosing feature selection methods yields reproducible results in microbiome data

Lingjing Jiang, Niina Haiminen, Anna-Paola Carrieri, Shi Huang, Yoshiki Vazquez-Baeza, Laxmi Parida, Ho-Cheol Kim, Austin D. Swafford, Rob Knight, and Loki Natarajan

Non-parametric estimation in an illness-death model with component-wise censoring

Anne Eaton, Yifei Sun, James Neaton, and Xianghua Luo

A multi-view model for relative and absolute microbial abundances

Brian D. Williamson, James P. Hughes, and Amy D. Willis

Parameter inference for a stochastic kinetic model of expanded polyglutamine proteins

H. F. Fisher, R. J. Boys, C. S. Gillespie, C. J. Proctor, and A. Golightly

Bayesian analysis of coupled cellular and nuclear trajectories for cell migration

Saptarshi Chakraborty, Tian Lan, Yiider Tseng, and Samuel W.K. Wong

Stratified Cox models with time-varying effects for national kidney transplant patients: A new block-wise steepest ascent method

Kevin He, Ji Zhu, Jian Kang, and Yi Li

Quantifying direct and indirect effect for longitudinal mediator and survival outcome using joint modeling approach

Cheng Zheng and Lei Liu

Non-homogeneous Markov chain for estimating the cumulative risk of multiple false positive screening tests

Marzieh Kadkhodaei Golmakani, Rebecca A. Hubbard, and Diana Miglioretti

Sample size formula for general win ratio analysis

Lu Mao, KyungMann Kim, and Xinran Miao

Book Reviews

Handbook of Measurement Error Models (Grace Y. Yi, Aurore Delaigle, and Paul Gustafson)

Reviewed by Li-Pang Chen

Supervised Machine Learning for Text Analysis in R (Emil Hvitfeldt and Julia Silge)

Reviewed by Han-Ming Wu

Multivariate Data Integration Using R: Methods and Applications with the mixOmics Package (Kim-Anh Lê Cao and Zoe Marie Welham)

Reviewed by Yuehua Cui

Behavior Analysis with Machine Learning Using R (Enrique Garcia Ceja)

Reviewed by Charlotte Wang

Papers to appear in future issues of Biometrics

Spatial+: a novel approach to spatial confounding

Emiko Dupont, Simon N. Wood, and Nicole H. Augustin

Discussion on "Spatial+: a novel approach to spatial confounding" by Emiko Dupont, Simon N. Wood, and Nicole H. Augustin

Brian J. Reich, Shu Yang, and Yawen Guan

Discussion on "Spatial+: a novel approach to spatial confounding" by Emiko Dupont, Simon N. Wood, and Nicole H. Augustin

Isa Marques and Thomas Kneib

Discussion on "Spatial+: a novel approach to spatial confounding" by Emiko Dupont, Simon N. Wood, and Nicole H. Augustin

Alexandra M. Schmidt

Discussion on "Spatial+: a novel approach to spatial confounding" by Emiko Dupont, Simon N. Wood, and Nicole H. Augustin

Georgia Papadogeorgou

Rejoinder to Discussions on "Spatial+: a novel approach to spatial confounding"
Emiko Dupont, Simon N. Wood, and Nicole H. Augustin

WiSER: robust and scalable estimation and inference of within-subject variances from intensive longitudinal data

Christopher A. German, Janet S. Sinsheimer, Jin Zhou, and Hua Zhou

Group sequential testing for cluster randomization trials with time-to-event endpoint

Sin-Ho Jung and Jianghao Li

Bridging preference-based instrumental variable studies and cluster-randomized encouragement experiments: study design, noncompliance, and average cluster effect ratio

Bo Zhang, Siyu Heng, Emily J. MacKay, and Ting Ye

Estimating mean potential outcome under adaptive treatment length strategies in continuous time

Hao Sun, Ashkan Ertefaie, and Brent Johnson

Design-based properties of the nearest neighbour spatial interpolator and its bootstrap mean squared error estimator

Lorenzo Fattorini, Marzia Marcheselli, Caterina Pisani, and Luca Pratelli

Pool adjacent violators algorithm assisted learning with application on estimating optimal individualized treatment regimes

Baojiang Chen, Ao Yuan, and Jing Qin

Multivariate Bayesian clustering using covariate-informed components with application to boreal vegetation sensitivity

Henry R. Scharf, Ann Raiho, Sierra Pugh, Carl Roland, David Swanson, Sarah Stehn, and Mevin Hooten

Flexible use of Copula-type model for dose-finding in drug combination clinical trials

Koichi Hashizume, Jun Tshuchida, and Sozu Takashi,

Efficient odds ratio estimation under two-phase sampling using error-prone data from a multi-national HIV research cohort

Sarah C. Lotspeich, Bryan E. Shepherd, Gustavo G. C. Amorim, Pamela A. Shaw, and Ran Tao

Integration of survival data from multiple studies

Steffen Ventz, Rahul Mazumder, and Lorenzo Trippa

Joint modeling of zero-inflated longitudinal proportions and time-to-event data with application to a gut microbiome study

Jiyuan Hu, Chan Wang, Martin J. Blaser, and Huilin Li

A linear noise approximation for stochastic epidemic models fit to partially observed incidence counts

Jonathan Fintzi, Jon Wakefield, and Vladimir N. Minin

Another look at regression analysis using ranked set samples with application to an osteoporosis study

Nasrin Faraji, Mohammad Jafari Jozani, and Nader Nematollahi

Varying-coefficient regression analysis for pooled biomonitoring

Dewei Wang, Xichen Mou, and Yan Liu

Weak-instrument robust tests in two-sample summary-data Mendelian randomization

Sheng Wang and Hyunseung Kang

A semiparametric isotonic regression model for skewed distributions with application to DNA-RNA-protein analysis

Chenguang Wang, Ao Yuan, Leslie Cope, and Jing Qin

Sample size estimation for cancer randomized trials in the presence of heterogeneous populations

Derek Dinart, Carine Bellera, and Virginie Rondeau

Multidimensional molecular measurements-environment interaction analysis for disease outcomes

Yaqing Xu, Mengyun Wu, and Shuangge Ma

Reducing subspace models for large-scale covariance regression

Alexander M. Franks

On estimating optimal regime for treatment initiation time based on restricted mean residual lifetime

Xin Chen, Rui Song, Jiajia Zhang, Swann Arp Adams, Liuquan Sun, and Wenbin Lu

Analysis of local sensitivity to nonignorability with missing outcomes and predictors

Heng Chen and Daniel F. Heitjan

Binacox: automatic cut-point detection in high-dimensional Cox model with applications in genetics

Simon Bussy, Mokhtar Z. Alaya, Anne-Sophie Jannot, and Agathe Guilloux

Bivariate small area estimation for binary and Gaussian variables based on a conditionally specified model

Hao Sun, Emily Berg, and Zhengyuan Zhu

Bayesian adaptive trial design for a continuous biomarker with possibly non-Linear or non-monotone prognostic or predictive effects

Yusha Liu, John A. Kairalla, and Lindsay A. Renfro

Joint association and classification analysis of multi-view data

Yunfeng Zhang and Irina Gaynanova

Extracting brain disease-related connectome subgraphs by adaptive dense subgraph discovery

Qiong Wu, Xiaoqi Huang, Adam Culbreth, James Waltz, Elliot Hong, and Shuo Chen

Nonparametric estimation of the survival distribution under covariate-induced dependent truncation

Bella Vakulenko-Lagun, Jing Qian, Sy-Han Chiou, Nancy Wang, and Rebecca A. Betensky

Re-calibrating pure risk integrating individual data from two-phase studies with external summary statistics

Jiayin Zheng, Yingye Zheng, and Li Hsu

Simultaneous variable selection in regression analysis of multivariate interval-censored data

Liuquan Sun, Shuwei Li, Lianming Wang, Xinyuan Song, and Xuemei Sui

Sufficient dimension reduction for populations with structured heterogeneity

Jared D. Huling and Menggang Yu

Hierarchical cancer heterogeneity analysis based on histopathological imaging features

Mingyang Ren, Qingzhao Zhang, Sanguo Zhang, Tingyan Zhong, Jian Huang, and Shuangge Ma

Accounting for post-randomization variables in meta-analysis: A joint meta-regression approach

Qinshu Lian, Jing Zhang, James S. Hodges, Yong Chen, and Haitao Chu

Elastic priors to dynamically borrow information from historical data in clinical trials

Liyun Jiang, Lei Nie, and Ying Yuan

Simultaneous feature selection and outlier detection with optimality guarantees

Luca Insolia, Ana Kenney, Francesca Chiaromonte, and Giovanni Felici

Human disease clinical treatment network for the elderly: Analysis of the Medicare inpatient length of stay and readmission data

Hao Mei, Ruofan Jia, Guanzhong Qiao, Zhenqiu Lin, and Shuangge Ma

Accelerated failure time modeling via nonparametric mixtures

Byungtae Seo and Sangwook Kang

Latent group detection in functional partially linear regression models

Wu Wang, Ying Sun, and Huixia Judy Wang

Sensitivity analyses informed by tests for bias in observational studies

Paul R. Rosenbaum

SMIM: a unified framework of survival sensitivity analysis using multiple imputation and Martingale

Shu Yang, Yilong Zhang, Guanghan Frank Liu, and Qian Guan

Causal inference with outcomes truncated by death in multiarm studies

Shanshan Luo, Wei Li, and Yangbo He

Reader Reaction to "Outcome-adaptive lasso: variable selection for causal inference" by Shortreed and Ertefaie (2017)

Ismaila Balde, Yi Yang, and Genevieve Lefebvre

Rejoinder to "Reader Reaction to "Outcome-adaptive lasso: variable selection for causal inference" by Shortreed and Ertefaie (2017)"

Jeremiah Jones, Ashkan Ertefaie, and Susan M. Shortreed

Estimation of separable direct and indirect effects in continuous time

Torben Martinussen and Mats Julius Stensrud

Modelling publication bias and p-hacking

Jonas Moss and Riccardo De Bin

Interim monitoring in sequential multiple assignment randomized trials

Liwen Wu, Junyao Wang, and Abdus S. Wahed

On restricted mean time in favor of treatment

Lu Mao

Bayesian multiple index models for environmental mixtures

Glen McGee, Ander Wilson, Thomas F. Webster, and Brent A. Coull

Spectra in Low-Rank Localized Layers (SpeLLL) for interpretable time-frequency analysis

Marie Tuft, Martica H. Hall, and Robert T. Krafty

Variable selection in nonlinear function-on-scalar regression

Rahul Ghosal and Arnab Maity

A matching procedure for sequential experiments that iteratively learns which covariates improve power

Adam Kapelner and Abba Krieger

Dynamic logistic state-space prediction model for clinical decision making

Jiakun Jiang, Wei Yang, Erin M. Schnellinger, Stephen E. Kimmel, and Wensheng Guo

Instrumental variable estimation of complier causal treatment effect with interval-censored data

Shuwei Li and Limin Peng

Evaluating the association between latent classes and competing risks outcomes with multi-phenotype data

Teng Fei, John Hanfelt, and Limin Peng

Jackknife model averaging for high-dimensional quantile regression

Miaomiao Wang, Xinyu Zhang, Alan T. K. Wan, Kang You, and Guohua Zou

Generalized case-control sampling under generalized linear models

Jacob M. Maronge, Ran Tao, Jonathan S. Schildcrout, and Paul J. Rathouz

CASANOVA: Permutation inference in factorial survival designs

Marc Ditzhaus, Jon Genuneit, Arnold Janssen, and Markus Pauly

Bayesian non-parametric quantile process regression and estimation of marginal quantile effects

Steven G. Xu and Brian J. Reich

Estimating perinatal critical windows of susceptibility to environmental mixtures via structured Bayesian regression tree pairs

Daniel Mork and Ander Wilson

Adaptive enrichment designs with a continuous biomarker

Nigel Stallard

Discussion on "Adaptive enrichment designs with a continuous biomarker" by Nigel Stallard
Rachael V. Phillips and Mark J. van der Laan

Discussion on "Adaptive enrichment designs with a continuous biomarker" by Nigel Stallard

James M. S. Wason

Discussion on "Adaptive enrichment designs with a continuous biomarker" by Nigel Stallard

Christopher Jennison

Discussion on "Adaptive enrichment designs with a continuous biomarker" by Nigel Stallard

Nancy Flournoy and Sergey Tarima

Rejoinder to Discussions on "Adaptive enrichment designs with a continuous biomarker"

Nigel Stallard

Logistic regression analysis of two-phase studies using generalized method of moments

Prosenjit Kundu and Nilanjan Chatterjee

Inference in response-adaptive clinical trials when the enrolled population varies over time

Massimiliano Russo, Steffen Ventz, Victoria Xin Wang, and Lorenzo Trippa

Improving efficiency of inference in clinical trials with external control data

Xinyu Li, Wang Miao, Fang Lu, and Xiao-Hua Zhou

A linear mixed model to estimate COVID-19-induced excess mortality

Johan Verbeeck, Christel Faes, Thomas Neyens, Niel Hens, Geert Verbeke, Patrick Deboosere, and Geert Molenberghs

A novel statistical test for treatment differences in clinical trials using a response adaptive forward looking Gittins Index Rule

Helen Yvette Barnett, Sofia S. Villar, Helena Geys, and Thomas Jaki

Integrating sample similarities into latent class analysis: A tree-structured shrinkage approach

Mengbing Li, Daniel E. Park, Maliha Aziz, Cindy M. Liu, Lance B. Price, and Zhenke Wu

An individual level infectious disease model in the presence of uncertainty from multiple, imperfect diagnostic tests

Caitlin Ward, Grant D. Brown, and Jacob J. Oleson

Non-iterative adjustment to regression estimators with population-based auxiliary information for semiparametric models

Fei Gao, and K. C. G. Chan

De-biased Lasso for generalized linear models with a diverging number of covariates

Lu Xia, Bin Nan, and Yi Li

Functional additive models for optimizing individualized treatment rules

Hyung Park, Eva Petkova, Thaddeus Tarpey, and R. Todd Ogden

A smoothed corrected score approach for proportional hazards model with misclassified discretized covariates induced by error-contaminated continuous time-dependent exposure

Xiao Song, Edward C. Chao, and Ching-Yun Wang

Sample size considerations for stepped wedge designs with subclusters

Kendra Davis-Plourde, Monica Taljaard, and Fan Li

A novel Bayesian functional spatial partitioning method with application to prostate cancer lesion detection using MRI

Maria Masotti, Lin Zhang, Ethan Leng, Greg J. Metzger, and Joseph S. Koopmeiners

Semiparametric additive time-varying coefficients model for longitudinal data with censored time origin

Yanqing Sun, Qiong Shou, Peter B. Gilbert, Fei Heng, and Xiyuan Qian

Covariate adjustment in continuous biomarker assessment

Ziyi Li, Yijian Huang, Dattatraya Patil, and Martin G. Sanda

Risk prediction with imperfect survival outcome information from electronic health records

Jue Hou, Stephanie F. Chan, Xuan Wang, and Tianxi Cai

Testing for heterogeneity in the utility of a surrogate marker

Layla Parast, Tianxi Cai, and Lu Tian

Selective prediction-set models with coverage rate guarantees

Jean Feng, Arjun Sondhi, Jessica Perry, and Noah Simon

Supervised two-dimensional functional principal component analysis with time-to-event outcomes and mammogram imaging data

Shu Jiang, Jiguo Cao, Bernard Rosner, and Graham A. Colditz

Estimation of the odds ratio in a proportional odds model with censored time-lagged outcome in a randomized clinical trial

Anastasios A. Tsiatis, Marie Davidian, and Shannon T. Holloway

Variable selection in regression-based estimation of dynamic treatment regimes

Zeyu Bian, Erica E.M. Moodie, Susan M. Shortreed, and Sahir Bhatnagar

Assessing intervention effects in a randomized trial within a social network

Shaina J. Alexandria, Michael G. Hudgens, and Allison E. Aiello

Improving trial generalizability using observational studies

Dasom Lee, Shu Yang, Lin Dong, Xiaofei Wang, Donglin Zeng, and Jianwen Cai

A formal causal interpretation of the case-crossover design

Zach Shahn, Miguel A. Hernan, and James M. Robins

Discussion on "A formal causal interpretation of the case-crossover design"

Per Kragh Andersen and Torben Martinussen

Discussion on "A formal causal interpretation of the case-crossover design"

Ruth M. Pfeiffer and Mitchell H. Gail

Discussion on "A formal causal interpretation of the case-crossover design"

Thomas Lumley

Rejoinder to Discussions on "A formal causal interpretation of the case-crossover design"

Zach Shahn, Miguel A. Hernan, and James M. Robins

Estimating cell type composition using isoform expression one gene at a time
Hillary M. Heiling, Douglas R. Wilson, Naim U. Rashid, Wei Sun, and Joseph G. Ibrahim

Design and analysis of two-phase studies with multivariate longitudinal data
Chiara Di Gravio, Ran Tao, and Jonathan S. Schildcrout

Ultra-high dimensional variable selection for doubly robust causal inference

Dingke Tang, Dehan Kong, Wenliang Pan, and Linbo Wang

Bayesian inference for stationary points in Gaussian process regression models for event-related potentials analysis

Cheng-Han Yu, Meng Li, Colin Noe, Simon Fischer-Baum, and Marina Vannucci

Inference for nonparanormal partial correlation via regularized rank-based nodewise regression

Haoyan Hu and Yumou Qiu

Neural networks for clustered and longitudinal data using mixed effects models

Francesca Mandel, Riddhi Pratim Ghosh, and Ian Barnett

Semiparametric count data regression for self-reported mental health

Daniel R. Kowal and Bohan Wu

A repeated measures approach to pooled and calibrated biomarker data

Abigail Sloan, Chao Cheng, Bernard Rosner, Regina G. Ziegler, Stephanie A. Smith-Warner, and Molin Wang

Bayesian nonparametric analysis of restricted mean survival time

Chenyang Zhang and Guosheng Yin

Generalized network structured models with mixed responses subject to measurement error and misclassification

Qihuang Zhang and Yun Grace Yi

Leveraging a surrogate outcome to improve inference on a partially missing target outcome

Zachary R. McCaw, Sheila M. Gaynor, Ryan Sun, and Xihong Lin

Screening methods for linear errors-in-variables models in high dimensions

Linh H. Nghiem, Francis K.C. Hui, Samuel Muller, and A.H. Welsh

Bayesian nonparametric analysis for the detection of spikes in noisy calcium imaging data

Laura D'Angelo, Antonio Canale, Zhaoxia Yu, and Michele Guindani

A joint fairness model with applications to risk predictions for under-represented populations

Hyungrok Do, Shinjini Nandi, Preston Putzel, Padhraic Smyth, and Judy Zhong

Bayesian spatiotemporal modeling on complex-valued fMRI signals via kernel convolutions

Cheng-Han Yu, Raquel Prado, Hernando Ombao, and Daniel Rowe

Multi-source single-cell data integration by MAW Barycenter for Gaussian mixture models

Lin Lin, Wei Shi, Jianbo Ye, and Jia Li

Estimated quadratic inference function for correlated failure time data

Feifei Yan, Yanyan Liu, Jianwen Cai, and Haibo Zhou

The Generalized Fisher’s Combination and accurate p-value calculation under dependence

Hong Zhang and Zheyang Wu

Joint gene network construction by single-cell RNA sequencing data

Meichen Dong, Yiping He, Yuchao Jiang, and Fei Zou

Inference for set-based effects in genetic association studies with interval-censored outcomes

Ryan Sun, Liang Zhu, Yimei Li, Yutaka Yasui, and Leslie Robison

Bayes optimal informer sets for early-stage drug discovery

Peng Yu, Spencer Ericksen, Anthony Gitter, and Michael A. Newton

Instrumental variable estimation of causal hazard ratio

Linbo Wang, Eric Tchetgen Tchetgen, Torben Martinussen, and Stijn Vansteelandt

Discussion on "Instrumental variable estimation of causal hazard ratio" by Linbo Wang, Eric Tchetgen Tchetgen, Torben Martinussen, and Stijn Vansteelandt

Brigham R. Frandsen

Discussion on "Instrumental variable estimation of causal hazard ratio" by Linbo Wang, Eric Tchetgen Tchetgen, Torben Martinussen, and Stijn Vansteelandt

Benjamin R. Baer, Robert L. Strawderman, and Ashkan Ertefaie

Discussion on "Instrumental variable estimation of causal hazard ratio" by Linbo Wang, Eric Tchetgen Tchetgen, Torben Martinussen, and Stijn Vansteelandt

A. James O’Malley, Pablo Martinez-Camblor, and Todd A. MacKenzie

Rejoinder to discussions on “Instrumental variable estimation of the causal hazard ratio”

Linbo Wang, Eric Tchetgen Tchetgen, Torben Martinussen, and Stijn Vansteelandt

Functional data analysis for longitudinal data with informative observation times

Caleb Weaver, Luo Xiao, and Wenbin Lu

A hierarchical model for analyzing multi-site individual-level disease surveillance data from multiple systems

Yuzi Zhang, Howard H. Chang, Qu Cheng, Philip A. Collender, Ting Li, Jinge He, and Justin V. Remais

Zero-inflated Poisson models with measurement error in response

Qihuang Zhang and Grace Y. Yi

Evaluating treatment effects in group sequential multivariate longitudinal studies with covariate adjustment

Neal O. Jeffries, James F. Troendle, and Nancy L. Geller

A time-heterogeneous D-vine copula model for unbalanced and unequally spaced longitudinal data

Md. Erfanul Hoque, Elif F. Acar, and Mahmoud Torabi

Bayesian interaction selection model for multi-modal neuroimaging data analysis

Yize Zhao, Ben Wu, and Jian Kang

Bayesian sample size determination using commensurate priors to leverage pre-experimental data

Haiyan Zheng, Thomas Jaki, and James M.S. Wason

Feature screening with latent responses

Congran Yu, Wenwen Guo, Xinyuan Song, and Hengjian Cui

Cross-trait prediction accuracy of summary statistics in genome-wide association studies

Bingxin Zhao, Fei Zou, and Hongtu Zhu

Increasing efficiency and reducing bias when assessing HPV vaccination efficacy by using non-targeted HPV strains

Lola Etievant, Joshua N. Sampson, and Mitchell H. Gail

Instrumented difference-in-differences

Ting Ye, Ashkan Ertefaie, James Flory, Sean Hennessy, and Dylan S. Small

Discussion on "Instrumented difference-in-differences" by Ting Ye, Ashkan Ertefaie, James Flory, Sean Hennessy, and Dylan S. Small

Jad Beyhum, Jean-Pierre Florens, and Ingrid Van Keilegom

Discussion on "Instrumented difference-in-differences" by Ting Ye, Ashkan Ertefaie, James Flory, Sean Hennessy, and Dylan S. Small

Zhiqiang Tan

Discussion on "Instrumented difference-in-differences" by Ting Ye, Ashkan Ertefaie, James Flory, Sean Hennessy, and Dylan S. Small

Hyunseung Kang

Discussion on "Instrumented difference-in-differences" by Ting Ye, Ashkan Ertefaie, James Flory, Sean Hennessy, and Dylan S. Small

Karla Diaz-Ordaz

Rejoinder to Discussions on "Instrumented difference-in-differences"
Ting Ye, Ashkan Ertefaie, James Flory, Sean Hennessy, and Dylan S. Small

Decomposition of variation of mixed variables by a latent mixed Gaussian copula model

Yutong Liu, Toni Darville, Xiaojing Zheng, and Quefeng Li

Continuous time-interaction processes for population size estimation, with an application to drug dealing in Italy

Linda Altieri, Alessio Farcomeni, and Danilo Alunni Fegatelli

Clustering high-dimensional data via feature selection

Tianqi Liu, Yu Lu, Biqing Zhu, and Hongyu Zhao

A general framework of nonparametric feature selection in high-dimensional data

Hang Yu, Yuanjia Wang, and Donglin Zeng

A note on familywise error rate for a primary and secondary endpoint

Michael A. Proschan and Dean A. Follmann

Nonparametric and semiparametric estimation with sequentially truncated survival data

Rebecca A. Betenksy, Jing Qian, and Jingyao Hou

Multi-kink quantile regression for longitudinal data with application to progesterone data analysis

Chuang Wan, Wei Zhong, Wenyang Zhang, and Changliang Zou

Nonparametric estimation of the causal effect of a stochastic threshold-based intervention

Lars van der Laan, Wenbo Zhang, and Peter B. Gilbert

Score test for missing at random or not under logistic missingness models

Hairu Wang, Zhiping Lu, and Yukun Liu

Domain selection and family-wise error rate for functional data: a unified framework

Konrad Abramowicz, Alessia Pini, Lina Schelin, Sara Sjostedt de Luna, Aymeric Stamm, and Simone Vantini

Robust approach to combining multiple markers to improve surrogacy

Xuan Wang, Layla Parast, Larry Han, Lu Tian, and Tianxi Cai

Model-based clustering of high-dimensional longitudinal data via regularization

Luoying Yang and Tong Tong Wu

Robust Bayesian variable selection for gene-environment interactions

Jie Ren, Fei Zhou, Xiaoxi Li, Shuangge Ma, Yu Jiang, and Cen Wu

An alternative metric for evaluating the potential Patient benefit of response-adaptive randomization procedures

Jennifer Proper and Thomas A. Murray

Random projection ensemble classification with high-dimensional time series

Fuli Zhang and Kung-Sik Chan

Coherent modeling of longitudinal causal effects on binary outcomes

Linbo Wang, Xiang Meng, Thomas Richardson, and James Robins

A Bayesian model with application for adaptive platform trials having temporal changes

Chenguang Wang, Min Lin, Gary L. Rosner, and Guoxing Soon

A compound decision approach to covariance matrix estimation

Huiqin Xin and Sihai Dave Zhao

A cross-validation statistical framework for asymmetric data integration

Lam Tran, Kevin He, Di Wang, and Hui Jiang

A Bayesian platform trial design to simultaneously evaluate multiple drugs in multiple indications with mixed endpoints

Yujie Zhao, Rui (Sammi) Tang, Yeting Du, and Ying Yuan

Functional group bridge for simultaneous regression and support estimation

Zhengjia Wang, John Magnotti, Michael S. Beauchamp, and Meng Li

Exact-corrected confidence interval for risk difference in noninferiority binomial trials

Nour Hawila and Arthur Berg

An Eigenvalue ratio approach to inferring population structure from whole genome sequencing data

Yuyang Xu, Zhonghua Liu, and Jianfeng Yao

Power analysis for cluster randomized trials with continuous co-primary endpoints

Siyun Yang, Mirjam Moerbeek, Monica Taljaard, and Fan Li

Simplifying the estimation of diagnostic testing accuracy over time for high specificity tests in the absence of a gold standard

Clara Drew, Moses Badio, Dehkontee Dennis, Lisa Hensley, Elizabeth Higgs, Michael Sneller, Mosoka Fallah, and Cavan Reilly

A Bayesian functional data model for surveys collected under informative sampling with application to mortality estimation using NHANES

Paul A. Parker and Scott H. Holan

Translocation detection from Hi-C data via scan statistics

Anthony Cheng, Disheng Mao, Yuping Zhang, Joseph Glaz, and Zhengqing Ouyang

Closed testing with Globaltest, with application in metabolomics

Ningning Xu, Aldo Solari, and Jelle J. Goeman

Robust functional principal component analysis via a functional pairwise spatial sign operator

Guangxing Wang, Sisheng Liu, Fang Han, and Chong-Zhi Di

Efficient and robust methods for causally interpretable meta-analysis: transporting inferences from multiple randomized trials to a target population

Issa J. Dahabreh, Sarah E. Robertson, Lucia C. Petito, Miguel A. Hernan, and Jon A. Steingrimsson

Nonparametric inverse probability weighted estimators based on the highly adaptive lasso

Ashkan Ertefaie, Nima S. Hejazi, and Mark J. van der Laan

It's all relative: regression analysis with compositional predictors

Gen Li, Yan Li, and Kun Chen

Post-treatment confounding in causal mediation studies: A cutting-edge problem and a novel solution via sensitivity analysis

Guanglei Hong, Fan Yang, and Xu Qin

Optimal test procedures for multiple hypotheses controlling the familywise expected loss

Willi Maurer, Frank Bretz, and Xiaolei Xun

Discussion on "Optimal test procedures for multiple hypotheses controlling the familywise expected loss" by Willi Maurer, Frank Bretz, and Xiaolei Xun

Yoav Benjamini, Ruth Heller, Abba Krieger, Saharon Rosset

Discussion on "Optimal test procedures for multiple hypotheses controlling the familywise expected loss" by Willi Maurer, Frank Bretz, and Xiaolei Xun

Sudipto Banerjee

Flexible copula model for integrating correlated multi-omics data from single-cell experiments

Zichen Ma, Shannon W. Davis, and Yen-Yi Ho

Semiparametric distributed lag quantile regression for modeling time-dependent exposure mixtures

Yuyan Wang, Akhgar Ghassabian, Bo Gu, Yelena Afnansyeva, Yiwei Li, Leonardo Trasande, and Mengling Liu

Structural cumulative survival models for estimation of treatment effects accounting for treatment switching in randomized experiments

Andrew Ying and Eric J. Tchetgen Tchetgen

Elastic analysis of irregularly or sparsely sampled curves

Lisa Steyer, Almond Stocker, and Sonja Greven

Automated analysis of low-field brain MRI in cerebral malaria

Danni Tu, Manu S. Goyal, Jordan D. Dworkin, Samuel Kampondeni, Lorenna Vidal, Eric Biondo-Savin, Sandeep Juvvadi, Prashant Raghavan, Jennifer Nicholas, Karen Chetcuti, Kelly Clark, Timothy Robert-Fitzgerald, Theodore D. Satterthwaite, Paul Yushkevich, Christos Davatzikos, Guray Erus, Nicholas J. Tustison, Douglas G. Postels, Terrie E. Taylor, Dylan S. Small, and Russell T. Shinohara

Subset selection for linear mixed models

Daniel R. Kowal

General independent censoring in event-driven trials with staggered entry

Jasmin Ruhl, Jan Beyersmann, and Sarah Friedrich

A general framework for subgroup detection via one-step value difference estimation

Dana Johnson, Wenbin Lu, and Marie Davidian

The central role of the identifying assumption in population size estimation

Serge Aleshin-Guendel, Mauricio Sadinle, and Jon Wakefield

Discussion on "The central role of the identifying assumption in population size estimation" by Serge Aleshin-Guendel, Mauricio Sadinle, and Jon Wakefield

John Whitehead

Discussion on "The central role of the identifying assumption in population size estimation" by Serge Aleshin-Guendel, Mauricio Sadinle, and Jon Wakefield

Li-Chun Zhang

Multi-wave validation sampling for error-prone electronic health records

Bryan E. Shepherd, Kyunghee Han, Tong Chen, Aihua Bian, Shannon Pugh, Stephany N. Duda, Thomas Lumley, William J. Heerman, and Pamela A. Shaw

Nonparametric inference of general while-alive estimands for recurrent events

Lu Mao

Dimension reduction for integrative survival analysis

Aaron J. Molstad and Rohit K. Patra

Pair-switching rerandomization

Ke Zhu and Hanzhong Liu

Infinite hidden Markov models for multiple multivariate time series with missing data

Lauren Hoskovec, Matthew D. Koslovsky, Kirsten Koehler, Nicholas Good, Jennifer L. Peel, John Volckens, and Ander Wilson

Concordance indices with left-truncated and right-censored data

Nicholas Hartman, Sehee Kim, Kevin He, and John D. Kalbfleisch

Solutions for surrogacy validation with longitudinal outcomes for a gene therapy

Emily K. Roberts, Michael R. Elliott, and Jeremy M. G. Taylor

Prioritizing candidate peptides for cancer vaccines through predicting peptide presentation by HLA-I proteins

Laura Y. Zhou, Fei Zou, and Wei Sun

Grouped generalized estimating equations for longitudinal data analysis

Tsubasa Ito and Shonosuke Sugasawa

A high-dimensional mediation model for a neuroimaging mediator: integrating clinical, neuroimaging, and neurocognitive data to mitigate late effects in pediatric cancer

Xiaoqing Jade Wang, Yimei Li, Wilburn E. Reddick, Heather M. Conklin, John O. Glass, Arzu Onar-Thomas, Amar Gajjar, Cheng Cheng, and Zhao-Hua Lu

Double reduction estimation and equilibrium tests in natural autopolyploid populations

David Gerard

A robust approach for electronic health record-based case-control studies with contaminated case pools

Guorong Dai, Yanyuan Ma, Jill Schnall, Jinbo Chen, and Raymond J. Carroll

Centre-augmented $\ell_2$-type regularization for subgroup learning

Ling Zhou, Ye He, Yingcun Xia, and Huazhen Lin

Quantile regression for nonignorable missing data with its application of analyzing electronic medical records

Aiai Yu, Yujie Zhong, Xingdong Feng, and Ying Wei

A Bayesian multivariate mixture model for high throughput spatial transcriptomics

Carter Allen, Yuzhou Chang, Brian Neelon, Won Chang, Hang J. Kim, Zihai Li, Qin Ma, and Dongjun Chung

Joint semiparametric models for case-cohort designs

Weibin Zhong and Guoqing Diao

Tractable Bayes of skew-elliptical link models for correlated binary data

Zhongwei Zhang, Reinaldo B. Arellano-Valle, Marc G. Genton, and Raphael Huser

Optimal multiple testing and design in clinical trials

Ruth Heller, Abba Krieger, and Saharon Rosset

A general modelling framework for open wildlife populations based on the Polya Tree prior

Alex Diana, Eleni Matechou, Jim Griffin, Todd Arnold, Simone Tenan, and Stefano Volponi

A novel penalized inverse-variance weighted estimator for Mendelian randomization with applications to COVID-19 outcomes

Siqi Xu, Peng Wang, Wing Kam Fung, and Zhonghua Liu

Testing weak nulls in matched observational studies

Colin B. Fogarty

Neural network on interval censored data with application to the prediction of Alzheimer’s Disease

Tao Sun and Ying Ding

A latent state space model for estimating brain dynamics from electroencephalogram (EEG) data

Qinxia Wang, Ji Loh, Xiaofu He, and Yuanjia Wang

Mendelian randomization mixed-scale treatment effect robust identification and estimation for causal inference

Zhonghua Liu, Ting Ye, Baoluo Sun, Mary Schooling, and Eric Tchetgen Tchetgen

Integrative Bayesian models using post-selective inference: a case study in radiogenomics

Snigdha Panigrahi, Shariq Mohammed, Arvind Rao, and Veerabhadran Baladandayuthapani

Bayesian treatment screening and selection using subgroup-specific utilities of response and toxicity

Juhee Lee, Peter F. Thall, and Pavlos Msaouel

Delivering spatially comparable inference on the risks of multiple severities of respiratory disease from spatially misaligned disease count data

Duncan Lee and Craig Anderson

Generalized propensity score approach to causal inference with spatial interference

A. Giffin, B. J. Reich, S. Yang, and A. G. Rappold

Bayesian regression analysis of skewed tensor responses

Inkoo Lee, Debajyoti Sinha, Qing Mai, Xin Zhang, and Dipankar Bandyopadhyay

Functional data analysis with covariate-dependent mean and covariance structures

Chenlin Zhang, Huazhen Lin, Li Liu, Jin Liu, and Yi Li

Multidimensional adaptive P-splines with application to Neurons’ activity studies

Maria Xose Rodriguez-Alvarez, Maria Durban, Paul H. C. Eilers, Dae-Jin Lee, and Francisco Gonzalez

Simultaneous cluster structure learning and estimation of heterogeneous graphs for matrix-variate fMRI data

Dong Liu, Changwei Zhao, Yong He, Lei Liu, Ying Guo, and Xinsheng Zhang

Estimating tree-based dynamic treatment regimes using observational data with restricted treatment sequences

Nina Zhou, Lu Wang, and Daniel Almirall

Joint inference for competing risks data using multiple endpoints

Jiyang Wen, Chen Hu, and Mei-Cheng Wang

Bayesian hierarchical quantile regression with application to characterizing the immune architecture of lung cancer

Priyam Das, Christine B. Peterson, Yang Ni, Alexandre Reuben, Jiexin Zhang, Jianjun Zhang, Kim-Anh Do, and Veerabhadran Baladandayuthapani

Segmented correspondence curve regression for quantifying covariate effects on the reproducibility of high-throughput experiments

Feipeng Zhang and Qunhua Li

Maximum likelihood estimation in the additive hazards model

Chengyuan Lu, Jelle Goeman, and Hein Putter

Frequentist model averaging for undirected Gaussian graphical models

Huihang Liu and Xinyu Zhang

Misdiagnosis-related harm quantification through mixture models and harm measures

Yuxin Zhu, Zheyu Wang, and David Newman-Toker

Adaptive Bayesian sum of trees model for covariate dependent spectral analysis

Yakun Wang, Zeda Li, and Scott A. Bruce

Penalized estimation of frailty-based illness-death models for semi-competing risks

Harrison T. Reeder, Junwei Lu, and Sebastien J. Haneuse

Change-plane analysis for subgroup detection with a continuous treatment

Peng Jin, Wenbin Lu, Yu Chen, and Mengling Liu

Concave likelihood-based regression with finite-support response variables

K. O. Ekvall and M. Bottai

Boosting distributional copula regression

Nicolai Hans, Nadja Klein, Florian Faschingbauer, Michael Schneider, and Andreas Mayr

Associating somatic mutation with clinical outcomes through kernel regression and optimal transport

Paul Little, Li Hsu, and Wei Sun

Asynchronous functional linear regression models for longitudinal data in reproducing kernel Hilbert space

Ting Li, Huichen Zhu, Tengfei Li, and Hongtu Zhu

Comparing COVID-19 incidences longitudinally per economic sector against the background of preventive measures and vaccination

Florian Stijven, Johan Verbeeck, and Geert Molenberghs

On generalized latent factor modeling and inference for high-dimensional binomial data

Ting Fung Ma, Fangfang Wang, and Jun Zhu

Microbiome subcommunity learning with logistic-tree normal latent Dirichlet allocation

Patrick LeBlanc and Li Ma

Spatial dependence modeling of latent susceptibility and time to joint damage in psoriatic arthritis

Fangya Mao and Richard J. Cook

Pattern-based clustering of daily weigh-in trajectories using dynamic time warping

Samantha Bothwell, Alex Kaizer, Ryan Peterson, Danielle Ostendorf, Victoria Catenacci, and Julia Wrobel

Combining parametric and nonparametric models to estimate treatment effects in observational studies

Daniel Daly-Grafstein and Paul Gustafson

Identifying brain hierarchical structures associated with Alzheimer’s disease

Yi Zhao, Bingkai Wang, Chin-Fu Liu, Andreia V. Faria, Michael I. Miller, Brian S. Caffo, and Xi Luo

How well can Fine Balance work for covariate balancing

Ruoqi Yu

Semiparametric estimation of the transformation model by leveraging external aggregate data in the presence of population heterogeneity

Yu-Jen Cheng, Yen-Chun Liu, Chang-Yu Tsai, and Chiung-Yu Huang

Contrasting principal stratum and hypothetical strategy estimands in multi-period crossover trials with incomplete data

John N.S. Matthews, Sofia Bazakou, Robin Henderson, and Linda D. Sharples

CEDAR: Communication Efficient Distributed Analysis for Regressions

C. Chang, Z. Bu, and Q. Long

Statistical inference and power analysis for direct and spillover effects in two-stage randomized experiments

Zhichao Jiang, Kosuke Imai, and Anup Malani

Estimating the area under the ROC curve when transporting a prediction model to a target population

Bing Li, Constantine Gatsonis, Issa J. Dahabreh, and Jon A. Steingrimsson

Latent multinomial models for extended batch mark data

Wei Zhang, Simon Bonner, and Rachel McCrea

A sensitivity analysis approach for the causal hazard ratio in randomized and observational studies

Rachel Axelrod and Daniel Nevo

Marginal proportional hazards models for clustered interval-censored data with time-dependent covariates

Kaitlyn Cook, Wenbin Lu, and Rui Wang

Efficient targeted learning of heterogeneous treatment effects for multiple subgroups

Waverly Wei, Maya Petersen, Mark J. van der Laan, Zeyu Zheng, Chong Wu, and Jingshen Wang

Improved semiparametric estimation of the proportional rate model with recurrent event data

Ming-Yueh Huang and Chiung-Yu Huang

Nonparametric scanning tests of homogeneity for hierarchical models with continuous covariates

David Todem, Wei-Wen Hsu, and KyungMann Kim

Identifying alert concentrations using a model-based bootstrap approach

Kathrin Möllenhoff, Kirsten Schorning, and Franziska Kappenberg

Hospital profiling using Bayesian decision theory

Johannes Hengelbrock, Johannes Rauh, Jona Cederbaum, Maximilian Kähler, and Michael Höhle

A semiparametric joint model for cluster size and subunit-specific interval-censored outcomes

Chun Yin Lee, Kin Yau Wong, K. F. Lam, and Dipankar Bandyopadhyay

Non-parametric estimation of the age-at-onset distribution from a cross-sectional sample

Soutrik Mandal, Jing Qin, and Ruth M. Pfeiffer

An information ratio based goodness-of-fit test for copula models on censored data

Tao Sun, Yu Cheng, and Ying Ding

Assessing exposure-time treatment effect heterogeneity in stepped wedge cluster randomized trials

Lara Maleyeff, Fan Li, Sebastien Haneuse, and Rui Wang

Design considerations for two stage enrichment clinical trials

Rosamarie Frieri, William F. Rosenberger, Nancy Flournoy, and Zhantao Lin

Bayesian sample size calculations for comparing two strategies in SMART studies

Armando Turchetta, Erica E. M. Moodie, David A. Stephens, and Sylvie D. Lambert

Efficient and robust approaches for analysis of SMARTs: illustration using the ADAPT-R trial

Lina Montoya, Michael Kosorok, Elvin Geng, Joshua Schwab, Thomas Odeny, and Maya Petersen

Inference for the dimension of a regression relationship using pseudo-covariates

Shih-Hao Huang, Kerby Shedden, and Hsin-wen Chang

Model uncertainty quantification in Cox regression

Gonzalo Garcia-Donato, Stefano Cabras, and Maria Eugenia Castellanos

Age-related model for estimating the symptomatic and asymptomatic transmissibility of COVID-19 patients

Jianbin Tan, Ye Shen, Yang Ge, Leonardo Martinez, and Hui Huang

Tensor response quantile regression with neuroimaging data

Bo Wei, Limin Peng, Ying Guo, Amita Manatunga, and Jennifer Stevens

Correcting delayed reporting of COVID-19 using the Generalized-Dirichlet-Multinomial method

Oliver Stoner, Alba Halliday, and Theo Economou